PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10042005
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 368aa    MW: 41469.8 Da    PI: 7.4071
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10042005genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1353.2e-1184115334
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                  ++k +rr+++NReAAr+sR+RKka++++Le  
  Lus10042005  84 ADKTQRRLAQNREAARKSRLRKKAYVQQLESS 115
                  79***************************974 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.7E-782161IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-883126No hitNo description
PROSITE profilePS502179.11784126IPR004827Basic-leucine zipper domain
PfamPF001703.9E-884119IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.5E-786128No hitNo description
PROSITE patternPS00036089104IPR004827Basic-leucine zipper domain
PfamPF141447.2E-28169244IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MMSSPTTQLA ILRGMGIYEP FQQISSWATT DPFRGDNHIL NNITTAASLA VPVESAAPEN  60
KAENGSHEST EPYKSDQEAG GRPADKTQRR LAQNREAARK SRLRKKAYVQ QLESSRLKLA  120
QLEQELVRAR QQGVYINNSL DFGSSRTLNS GIATFEMEYA HWVGEQHKQV SELRRAMQAH  180
VGDVELRMLL ENGLNHFNNL FLMKADAARA DVFYLISGKW RTSVERFFLW IGGFRPSELL  240
NVLLPQLEPL TDPQHSEICT LRQSCQQAED ALSQGVEKLQ QTLSQSMAVD QSIAGSYRDQ  300
MAASIERLEG LEGFANQADH LRSQTLHHMS RILTTRQAAR FMLLLGEYFE RLHALSSLWS  360
ARPREPT*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU8308620.0EU830862.1 Linum usitatissimum clone LU0032G12 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002513852.10.0PREDICTED: transcription factor TGA7
RefseqXP_015571562.10.0PREDICTED: transcription factor TGA7
RefseqXP_015571563.10.0PREDICTED: transcription factor TGA7
SwissprotQ93ZE21e-150TGA7_ARATH; Transcription factor TGA7
TrEMBLB9RJD30.0B9RJD3_RICCO; Transcription factor TGA7, putative
STRINGPOPTR_0005s16400.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77920.11e-141bZIP family protein